Y box binding protein 3

mammalian protein found in Rattus norvegicus

Protein protein Q28557553

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Summary

Y box binding protein 3 is a protein^[1].

Key Facts

Y box binding protein 3's instance of is recorded as protein^[2].
Y box binding protein 3's subclass of is recorded as protein^[3].
Y box binding protein 3's UniProt protein ID is recorded as Otto von Knobelsdorff^[4].
Y box binding protein 3's part of is recorded as Nucleic acid-binding, OB-fold^[5].
Y box binding protein 3's part of is recorded as Cold-shock protein, DNA-binding domain, protein family^[6].
Y box binding protein 3's part of is recorded as Cold shock domain, protein family^[7].
Y box binding protein 3's has part is recorded as Cold shock domain^[8].
Y box binding protein 3's has part is recorded as Cold-shock protein, DNA-binding^[9].
Y box binding protein 3's has part is recorded as Cold-shock conserved site^[10].
Y box binding protein 3's RefSeq protein ID is recorded as NP_114185^[11].
Y box binding protein 3's RefSeq protein ID is recorded as XP_038964378^[12].
Y box binding protein 3's RefSeq protein ID is recorded as XP_038964379^[13].
Y box binding protein 3's molecular function is recorded as nucleic acid binding^[14].
Y box binding protein 3's molecular function is recorded as DNA binding^[15].
Y box binding protein 3's molecular function is recorded as single-stranded DNA binding^[16].
Y box binding protein 3's cell component is recorded as nucleus^[17].
Y box binding protein 3's cell component is recorded as cytoplasm^[18].
Y box binding protein 3's cell component is recorded as gap junction^[19].
Y box binding protein 3's biological process is recorded as negative regulation of transcription by RNA polymerase II^[20].
Y box binding protein 3's biological process is recorded as spermatogenesis^[21].
Y box binding protein 3's biological process is recorded as animal organ regeneration^[22].
Y box binding protein 3's encoded by is recorded as Ybx3^[23].
Y box binding protein 3's found in taxon is recorded as brown rat^[24].
Y box binding protein 3's Ensembl protein ID is recorded as ENSRNOP00000007427^[25].
Y box binding protein 3's Ensembl protein ID is recorded as ENSRNOP00000059241^[26].

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Quick Facts

Instance of protein

Subclass of protein

Part of Nucleic acid-binding, OB-fold, Cold-shock protein, DNA-binding domain, protein family, Cold shock domain, protein family

Properties

Biological process negative regulation of transcription by RNA polymerase II, spermatogenesis, animal organ regeneration

Cell component nucleus, cytoplasm, gap junction

Encoded by Ybx3

Found in taxon brown rat

Has part(s) Cold shock domain, Cold-shock protein, DNA-binding, Cold-shock conserved site

Imported from wholeness_audit_2026-05-02

Molecular function nucleic acid binding, DNA binding, single-stranded DNA binding

External References (3)

Ensembl protein id ENSRNOP00000007427, ENSRNOP00000059241

Refseq protein id NP_114185, XP_038964378, XP_038964379

Uniprot protein id Otto von Knobelsdorff

🏷️ Also known as

en cold shock domain-containing protein A en cold shock domain protein A en DNA-binding protein A en muscle Y-box protein YB2 en RYB-A en Y box binding protein 3 en Y-box-binding protein 3 en Y-box-binding protein A en Ybx3

References

Programmatic citations — every numbered marker resolves to a verifiable graph row below.

Direct Wikidata claims

[2] ↑ Y box binding protein 3 — instance of (P31): protein. UniProt. Retrieved 2022-05-25. wikidata.org.
[3] ↑ Y box binding protein 3 — subclass of (P279): protein. UniProt. Retrieved 2017-01-19. wikidata.org.
[4] ↑ Y box binding protein 3 — UniProt protein ID (P352): Otto von Knobelsdorff. UniProt. Retrieved 2022-05-25. wikidata.org.
[5] ↑ Y box binding protein 3 — part of (P361): Nucleic acid-binding, OB-fold. InterPro Release 71.0. ebi.ac.uk. Provenance: wikidata.org.
[6] ↑ Y box binding protein 3 — part of (P361): Cold-shock protein, DNA-binding domain, protein family. wikidata.org.
[7] ↑ Y box binding protein 3 — part of (P361): Cold shock domain, protein family. wikidata.org.
[8] ↑ Y box binding protein 3 — has part(s) (P527): Cold shock domain. InterPro Release 71.0. ebi.ac.uk. Provenance: wikidata.org.
[9] ↑ Y box binding protein 3 — has part(s) (P527): Cold-shock protein, DNA-binding. InterPro Release 71.0. ebi.ac.uk. Provenance: wikidata.org.
[10] ↑ Y box binding protein 3 — has part(s) (P527): Cold-shock conserved site. InterPro Release 71.0. ebi.ac.uk. Provenance: wikidata.org.
[11] ↑ Y box binding protein 3 — RefSeq protein ID (P637): NP_114185. Q20641742. Retrieved 2022-03-20. wikidata.org.
[12] ↑ Y box binding protein 3 — RefSeq protein ID (P637): XP_038964378. Q20641742. Retrieved 2022-03-20. wikidata.org.
[13] ↑ Y box binding protein 3 — RefSeq protein ID (P637): XP_038964379. Q20641742. Retrieved 2022-03-20. wikidata.org.
[14] ↑ Y box binding protein 3 — molecular function (P680): nucleic acid binding. GOA. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[15] ↑ Y box binding protein 3 — molecular function (P680): DNA binding. GOA. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[16] ↑ Y box binding protein 3 — molecular function (P680): single-stranded DNA binding. A novel growth-inducible gene that encodes a protein with a conserved cold-shock domain. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[17] ↑ Y box binding protein 3 — cell component (P681): nucleus. GOA. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[18] ↑ Y box binding protein 3 — cell component (P681): cytoplasm. GOA. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[19] ↑ Y box binding protein 3 — cell component (P681): gap junction. Association of connexin36 and zonula occludens-1 with zonula occludens-2 and the transcription factor zonula occludens-1-associated nucleic acid-binding protein at neuronal gap junctions in rodent retina. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[20] ↑ Y box binding protein 3 — biological process (P682): negative regulation of transcription by RNA polymerase II. A novel growth-inducible gene that encodes a protein with a conserved cold-shock domain. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[21] ↑ Y box binding protein 3 — biological process (P682): spermatogenesis. Expression of a Y-box protein, YB2/RYB-a, precedes protamine 2 expression during spermatogenesis in rodents. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[22] ↑ Y box binding protein 3 — biological process (P682): animal organ regeneration. A novel growth-inducible gene that encodes a protein with a conserved cold-shock domain. Retrieved 2019-02-14. ebi.ac.uk. Provenance: wikidata.org.
[23] ↑ Y box binding protein 3 — encoded by (P702): Ybx3. UniProt. Retrieved 2022-05-25. wikidata.org.
[24] ↑ Y box binding protein 3 — found in taxon (P703): brown rat. UniProt. Retrieved 2022-05-25. wikidata.org.
[25] ↑ Y box binding protein 3 — Ensembl protein ID (P705): ENSRNOP00000007427. ensembl Release 106. wikidata.org.
[26] ↑ Y box binding protein 3 — Ensembl protein ID (P705): ENSRNOP00000059241. ensembl Release 106. wikidata.org.

Class ancestry

[1] ↑ Y box binding protein 3 is an instance of protein (Q8054) [P31, primary]. Wikidata. wikidata.org.

📑 Cite this page

Use these citations when quoting this entity in research, articles, AI prompts, or wherever provenance matters. We aggregate Wikidata + Wikipedia + authoritative open-data sources; the stitched, scored, cross-referenced view is what 4ort.xyz contributes.

APA

4ort.xyz Knowledge Graph. (2026). Y box binding protein 3. Retrieved May 3, 2026, from https://4ort.xyz/entity/y-box-binding-protein-3-q28557553

MLA

“Y box binding protein 3.” 4ort.xyz Knowledge Graph, 4ort.xyz, 3 May. 2026, https://4ort.xyz/entity/y-box-binding-protein-3-q28557553.

BibTeX

@misc{4ortxyz_y-box-binding-protein-3-q28557553_2026, author = {{4ort.xyz Knowledge Graph}}, title = {{Y box binding protein 3}}, year = {2026}, url = {https://4ort.xyz/entity/y-box-binding-protein-3-q28557553}, note = {Accessed: 2026-05-03}}

LLM prompt

According to 4ort.xyz Knowledge Graph (aggregator of Wikidata, Wikipedia, and authoritative open-data sources): Y box binding protein 3 — https://4ort.xyz/entity/y-box-binding-protein-3-q28557553 (retrieved 2026-05-03)

Canonical URL: https://4ort.xyz/entity/y-box-binding-protein-3-q28557553 · Last refreshed: May 3, 2026