Q: What is SeqKit used for?

A: SeqKit is used for manipulating FASTA and FASTQ files, which are common formats in bioinformatics for storing sequence data. It provides tools for tasks like filtering, converting, and analyzing these files.

Q: What programming language is SeqKit written in?

A: SeqKit is written in Go, a programming language known for its efficiency and cross-platform compatibility.

Q: Is SeqKit free to use?

A: Yes, SeqKit is released under the MIT License, which allows for free use, modification, and distribution.

Q: On which operating systems can SeqKit run?

A: SeqKit is compatible with Linux, Microsoft Windows, and macOS.

Q: Where can I find the source code for SeqKit?

A: The source code for SeqKit is available on GitHub at [https://github.com/shenwei356/seqkit](https://github.com/shenwei356/seqkit).

SeqKit

toolkit for fasta and fastq manipulation

SoftwareApplication software Q115348765

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Key Facts

Copyright license: MIT License^[1]
Programmed in: Go^[2]
Operating system: Microsoft Windows^[3], macOS^[4], Linux^[5]
Software version identifier: 2.3.1^[6], 2.3.0^[7], 0.1^[8], 0.1.1^[9], 0.1.2^[10], 0.1.3^[11], 0.1.3.1^[12], 0.1.4^[13], 0.1.4.1^[14], 0.1.5^[15], 0.1.5.1^[16], 0.1.5.2^[17], 0.1.6^[18], 0.1.7^[19]

⭐ Popularity Graph

1/100 established

Quick Facts

Instance of software

Official website bioinf.shenwei.me

Has use bioinformatics

Properties

Described by source SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation

Operating system Microsoft Windows, macOS, Linux

Programmed in Go

Software version identifier 2.3.1, 2.3.0, 0.1, 0.1.1, 0.1.2, 0.1.3, 0.1.3.1, 0.1.4, 0.1.4.1, 0.1.5, 0.1.5.1, 0.1.5.2, 0.1.6, 0.1.7, 0.1.8, 0.1.9, 0.2.0, 0.2.1, 0.2.2, 0.2.3, 0.2.4, 0.2.4.1, 0.2.5, 0.2.5.1, 0.2.6, 0.2.7, 0.2.8, 0.2.9, 0.3.0, 0.3.1, 0.3.1.1, 0.3.2, 0.3.3, 0.3.4, 0.3.4.1, 0.3.5, 0.3.6, 0.3.7, 0.3.8, 0.3.8.1, 0.3.9, 0.4.0, 0.4.1, 0.4.2, 0.4.3, 0.4.4, 0.4.5, 0.5.0, 0.5.1, 0.5.2, 0.5.3, 0.5.4, 0.5.5, 0.6.0, 0.7.0, 0.7.1, 0.7.2, 0.8.0, 0.8.1, 0.9.0, 0.9.1, 0.9.2, 0.9.3, 0.10.0, 0.10.1, 0.10.2, 0.11.0, 0.12.0, 0.12.1, 0.13.0, 0.13.1, 0.13.2, 0.14.0, 0.15.0, 0.16.0, 0.16.1, 2.0.0, 2.1.0, 2.2.0, 2.4.0, 2.5.0, 2.5.1, 2.6.0, 2.6.1, 2.7.0, 2.8.0, 2.8.1, 2.8.2, 2.9.0, 2.10.0, 2.10.1, 2.11.0, 2.12.0, 2.13.0, 2.14.0

Source code repository url github.com

External References (1)

Slackbuilds package academic/seqkit

🏷️ Also known as

en SeqKit

🔗 Connections

Operating system 3

Linux, Microsoft Windows, macOS

MIT License

Has use 1

bioinformatics

Instance of 1

software

Programmed in 1

References

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APA 4ort.xyz Knowledge Graph. (2026). SeqKit. Retrieved March 9, 2026, from https://4ort.xyz/entity/seqkit

MLA “SeqKit.” 4ort.xyz Knowledge Graph, 4ort.xyz, 9 Mar. 2026, https://4ort.xyz/entity/seqkit.

BibTeX

@misc{4ortxyz_seqkit_2026, author = {{4ort.xyz Knowledge Graph}}, title = {{SeqKit}}, year = {2026}, url = {https://4ort.xyz/entity/seqkit}, note = {Accessed: 2026-03-09}}

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According to 4ort.xyz Knowledge Graph (aggregator of Wikidata, Wikipedia, and authoritative open-data sources): SeqKit — https://4ort.xyz/entity/seqkit (retrieved 2026-03-09)

Canonical URL: https://4ort.xyz/entity/seqkit · Last refreshed: March 9, 2026

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Rolling log of changes to this entity's Wikidata record. Values shown reflect the current state of each edited property — follow the history link to see the precise diff for any edit.

23d ago · Github-wiki-bot bot · 2026-09-25 view diff on Wikidata ↗

Operating system → Microsoft Windows, macOS, Linux

Programmed in → Go

Instance of → —

Copyright license → MIT License

+ 18 other properties edited (see Wikidata diff for full list)

"/* wbeditentity-statements-single-property-update:1||2 */ Software version identifier, Update with GitHub data ([[:toollabs:editgroups/b/CB/2f883a677c45|details]])"

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