GDP-6-deoxy-alpha-D-mannose

chemical compound

ChemicalSubstance group_of_stereoisomers Q27102509

Press Enter · cited answer in seconds

GDP-6-deoxy-alpha-D-mannose

Summary

GDP-6-deoxy-alpha-D-mannose is a group of stereoisomers^[1].

Key Facts

GDP-6-deoxy-alpha-D-mannose's instance of is recorded as group of stereoisomers^[2].
GDP-6-deoxy-alpha-D-mannose's canonical SMILES is recorded as CC1C(C(C(C(O1)OP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)N3C=NC4=C3NC(=NC4=O)N)O)O)O)O)O^[3].
GDP-6-deoxy-alpha-D-mannose's chemical formula is recorded as C₁₆H₂₅N₅O₁₅P₂^[4].
GDP-6-deoxy-alpha-D-mannose is a type of chemical compound^[5].
GDP-6-deoxy-alpha-D-mannose is part of GDP-D-rhamnose biosynthetic process^[6].
GDP-6-deoxy-alpha-D-mannose is part of GDP-D-rhamnose metabolic process^[7].
GDP-6-deoxy-alpha-D-mannose's isomeric SMILES is recorded as C[C@@H]1C@HO^C@HO">[8].
GDP-6-deoxy-alpha-D-mannose's mass is recorded as {'unit': 'http://www.wikidata.org/entity/Q483261', 'amount': '+589.082'}^[9].
GDP-6-deoxy-alpha-D-mannose's subject has role is recorded as primary metabolite^[10].

⭐ Popularity Graph

0/100 long tail

Quick Facts

Instance of group of stereoisomers

Subclass of chemical compound

Part of GDP-D-rhamnose biosynthetic process, GDP-D-rhamnose metabolic process

Properties

Canonical smiles CC1C(C(C(C(O1)OP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)N3C=NC4=C3NC(=NC4=O)N)O)O)O)O)O

Chemical formula C₁₆H₂₅N₅O₁₅P₂

Isomeric smiles C[C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)OP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=NC4=C3NC(=NC4=O)N)O)O)O)O)O

Mass +589.082

Subject has role primary metabolite

External References (15)

Cas registry number 15839-74-4

Chebi id 17661

Chembl id CHEMBL1233001

Chemspider id 388945

Drugbank id DB02547

Dsstox substance id DTXSID301139243

Human metabolome database id HMDB0001499

Inchi InChI=1S/C16H25N5O15P2/c1-4-7(22)9(24)11(26)15(33-4)35-38(30,31)36-37(28,29)32-2-5-8(23)10(25)14(34-5)21-3-18-6-12(21)19-16(17)20-13(6)27/h3-5,7-11,14-15,22-26H,2H2,1H3,(H,28,29)(H,30,31)(H3,17,19,20,27)/t4-,5-,7-,8-,9+,10-,11+,14-,15-/m1/s1

Inchikey LQEBEXMHBLQMDB-GDJBGNAASA-N

Kegg id C03117

Pdb ligand id GDR

Pdb structure id 1N7G

Probes and drugs id PD059931

Pubchem cid 439912, 135398578

Surechembl id 29456758

🏷️ Also known as

en GDP-6-deoxy-alpha-D-mannose

References

Programmatic citations — every numbered marker resolves to a verifiable graph row below.

Direct Wikidata claims

[2] ↑ GDP-6-deoxy-alpha-D-mannose — instance of (P31): group of stereoisomers. wikidata.org.
[3] ↑ GDP-6-deoxy-alpha-D-mannose — canonical SMILES (P233): CC1C(C(C(C(O1)OP(=O)(O)OP(=O)(O)OCC2C(C(C(O2)N3C=NC4=C3NC(=NC4=O)N)O)O)O)O)O. PubChem. Retrieved 2016-10-19. wikidata.org.
[4] ↑ GDP-6-deoxy-alpha-D-mannose — chemical formula (P274): C₁₆H₂₅N₅O₁₅P₂. PubChem. Retrieved 2016-10-19. wikidata.org.
[5] ↑ GDP-6-deoxy-alpha-D-mannose — subclass of (P279): chemical compound. wikidata.org.
[6] ↑ GDP-6-deoxy-alpha-D-mannose — part of (P361): GDP-D-rhamnose biosynthetic process. Gene Ontology release 2019-11-16. wikidata.org.
[7] ↑ GDP-6-deoxy-alpha-D-mannose — part of (P361): GDP-D-rhamnose metabolic process. Gene Ontology release 2019-11-16. wikidata.org.
[8] ↑ GDP-6-deoxy-alpha-D-mannose — isomeric SMILES (P2017): C[C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)OP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=NC4=C3NC(=NC4=O)N)O)O)O)O)O. PubChem. Retrieved 2016-10-19. wikidata.org.
[9] ↑ GDP-6-deoxy-alpha-D-mannose — mass (P2067): {'unit': 'http://www.wikidata.org/entity/Q483261', 'amount': '+589.082'}. PubChem. Retrieved 2016-10-19. wikidata.org.
[10] ↑ GDP-6-deoxy-alpha-D-mannose — subject has role (P2868): primary metabolite. Reactome. plantreactome.gramene.org. Provenance: wikidata.org.

Class ancestry

[1] ↑ GDP-6-deoxy-alpha-D-mannose is an instance of group of stereoisomers (Q59199015) [P31, primary]. Wikidata. wikidata.org.

📑 Cite this page

Use these citations when quoting this entity in research, articles, AI prompts, or wherever provenance matters. We aggregate Wikidata + Wikipedia + authoritative open-data sources; the stitched, scored, cross-referenced view is what 4ort.xyz contributes.

APA

4ort.xyz Knowledge Graph. (2026). GDP-6-deoxy-alpha-D-mannose. Retrieved May 3, 2026, from https://4ort.xyz/entity/gdp-6-deoxy-alpha-d-mannose

MLA

“GDP-6-deoxy-alpha-D-mannose.” 4ort.xyz Knowledge Graph, 4ort.xyz, 3 May. 2026, https://4ort.xyz/entity/gdp-6-deoxy-alpha-d-mannose.

BibTeX

@misc{4ortxyz_gdp-6-deoxy-alpha-d-mannose_2026, author = {{4ort.xyz Knowledge Graph}}, title = {{GDP-6-deoxy-alpha-D-mannose}}, year = {2026}, url = {https://4ort.xyz/entity/gdp-6-deoxy-alpha-d-mannose}, note = {Accessed: 2026-05-03}}

LLM prompt

According to 4ort.xyz Knowledge Graph (aggregator of Wikidata, Wikipedia, and authoritative open-data sources): GDP-6-deoxy-alpha-D-mannose — https://4ort.xyz/entity/gdp-6-deoxy-alpha-d-mannose (retrieved 2026-05-03)

Canonical URL: https://4ort.xyz/entity/gdp-6-deoxy-alpha-d-mannose · Last refreshed: May 3, 2026

Edit History

Rolling log of changes to this entity's Wikidata record. Values shown reflect the current state of each edited property — follow the history link to see the precise diff for any edit.

14w ago · Nabbegat · 2026-06-19 view diff on Wikidata ↗

Chembl id → CHEMBL1233001

Pdb structure id → 1N7G

Dsstox substance id → DTXSID301139243

Probes and drugs id → PD059931

+ 21 other properties edited (see Wikidata diff for full list)

"/* wbeditentity-update-languages-short:0||tr */ QuickStatements 3.0 [[:toollabs:qs-dev/batch/37300|batch #37300]]"

Live feed via Wikidata EventStreams. New edits appear within minutes of being made on Wikidata.