CLN3

protein-coding gene in the species Homo sapiens

Class type of: protein-coding gene Q14905126

Press Enter · cited answer in seconds

Summary

CLN3 is a gene^[1]. CLN3 is a type of protein-coding gene^[2].

Key Facts

HomoloGene ID: 37259^[3]
Genomic start: 28474111^[4], 28477974^[5], 28477983^[6]
Genomic end: 28495575^[7], 28503333^[8], 28506896^[9]
Ortholog: Cln3^[10], YHC3^[11], cln-3.3^[12], cln-3.1^[13], cln-3.2^[14]
Encodes: CLN3 lysosomal/endosomal transmembrane protein, battenin^[15]
Found in taxon: Homo sapiens^[16]

⭐ Popularity Graph

11/100 long tail

🌐 Wiki Languages

4 / 428 langs

📈 Wikipedia Views · last 12 months

176 views trend: hourly, last 13h

Quick Facts

Instance of gene

Subclass of protein-coding gene

Properties

Chromosome human chromosome 16

Cytogenetic location 16p12.1

Encodes CLN3 lysosomal/endosomal transmembrane protein, battenin

Expressed in mucosa of transverse colon, placenta, granulocyte, blood, monocyte, epithelium of colon, rectum, right adrenal cortex, left adrenal gland, right lobe of thyroid gland

Found in taxon Homo sapiens

Genetic association neuronal ceroid lipofuscinosis 3

Genomic end 28.5M (28.5M–28.5M, n=3)

Genomic start 28.5M (28.5M–28.5M, n=3)

Homologene id 37259

Ortholog Cln3, Cln3, YHC3, cln-3.3, Cln3, cln-3.1, cln3, cln-3.2

Strand orientation reverse strand

Identifiers (11)

Ensembl gene id ENSG00000188603

Ensembl transcript id ENST00000333496, ENST00000355477, ENST00000357806, ENST00000357857, ENST00000359984, ENST00000360019, ENST00000395653, ENST00000561505, ENST00000561689, ENST00000563874, ENST00000564091, ENST00000564574, ENST00000565047, ENST00000565140, ENST00000565236, ENST00000565316, ENST00000565354, ENST00000565688, ENST00000565778, ENST00000566040, ENST00000566057, ENST00000566083, ENST00000566472, ENST00000566816, ENST00000566824, ENST00000567160, ENST00000567495, ENST00000567804, ENST00000567963, ENST00000568076, ENST00000568422, ENST00000568443, ENST00000568452, ENST00000568472, ENST00000568497, ENST00000568558, ENST00000569030, ENST00000569430, ENST00000628023, ENST00000635861, ENST00000635958, ENST00000635973, ENST00000636147, ENST00000636172, ENST00000636228, ENST00000636351, ENST00000636355, ENST00000636685, ENST00000636839, ENST00000636853, ENST00000636907, ENST00000636977, ENST00000637050, ENST00000637100, ENST00000637107, ENST00000637110, ENST00000637184, ENST00000637578, ENST00000637686, ENST00000637699, ENST00000637871, ENST00000637985

Entrez gene id 1201

Exact match identifiers.org

Freebase id /m/0fblsz

Hgnc gene symbol CLN3

Hgnc id 2074

Microsoft academic id (discontinued) 2779831896

Omim id 607042

Refseq rna id NM_001286110, NM_000086, NM_001042432, NM_001286104, NM_001286105, NM_001286109

Umls cui C1413495

🌐 Available in 4 languages

enBattenin faCLN3 ttCLN3 ukCLN3

🏷️ Also known as

en BTN1 en BTS en ceroid-lipofuscinosis, neuronal 3 en CLN3 en CLN3, battenin en CLN3 lysosomal/endosomal transmembrane protein, battenin en JNCL

References

Programmatic citations — every numbered marker resolves to a verifiable graph row below.

Direct Wikidata claims

[2] ↑ CLN3 — subclass of (P279): protein-coding gene. NCBI homo sapiens annotation release 107. Retrieved 2016-10-02. wikidata.org.
[3] ↑ CLN3 — HomoloGene ID (P593): 37259. NCBI Gene. Retrieved 2022-05-15. wikidata.org.
[4] ↑ CLN3 — genomic start (P644): 28474111. ensembl Release 106. wikidata.org.
[5] ↑ CLN3 — genomic start (P644): 28477974. ensembl Release 106. wikidata.org.
[6] ↑ CLN3 — genomic start (P644): 28477983. ensembl Release 106. wikidata.org.
[7] ↑ CLN3 — genomic end (P645): 28495575. ensembl Release 106. wikidata.org.
[8] ↑ CLN3 — genomic end (P645): 28503333. ensembl Release 106. wikidata.org.
[9] ↑ CLN3 — genomic end (P645): 28506896. ensembl Release 106. wikidata.org.
[10] ↑ CLN3 — ortholog (P684): Cln3. HomoloGene build68. wikidata.org.
[11] ↑ CLN3 — ortholog (P684): YHC3. HomoloGene build68. wikidata.org.
[12] ↑ CLN3 — ortholog (P684): cln-3.3. HomoloGene build68. wikidata.org.
[13] ↑ CLN3 — ortholog (P684): cln-3.1. HomoloGene build68. wikidata.org.
[14] ↑ CLN3 — ortholog (P684): cln-3.2. HomoloGene build68. wikidata.org.
[15] ↑ CLN3 — encodes (P688): CLN3 lysosomal/endosomal transmembrane protein, battenin. UniProt. Retrieved 2017-07-06. wikidata.org.
[16] ↑ CLN3 — found in taxon (P703): Homo sapiens. ensembl Release 106. wikidata.org.

Class ancestry

[1] ↑ CLN3 is an instance of gene (Q7187) [P31, primary]. Wikidata. wikidata.org.

📑 Cite this page

Use these citations when quoting this entity in research, articles, AI prompts, or wherever provenance matters. We aggregate Wikidata + Wikipedia + authoritative open-data sources; the stitched, scored, cross-referenced view is what 4ort.xyz contributes.

APA 4ort.xyz Knowledge Graph. (2026). CLN3. Retrieved October 30, 2026, from https://4ort.xyz/entity/cln3

MLA “CLN3.” 4ort.xyz Knowledge Graph, 4ort.xyz, 30 Oct. 2026, https://4ort.xyz/entity/cln3.

BibTeX

@misc{4ortxyz_cln3_2026, author = {{4ort.xyz Knowledge Graph}}, title = {{CLN3}}, year = {2026}, url = {https://4ort.xyz/entity/cln3}, note = {Accessed: 2026-10-30}}

LLM prompt

According to 4ort.xyz Knowledge Graph (aggregator of Wikidata, Wikipedia, and authoritative open-data sources): CLN3 — https://4ort.xyz/entity/cln3 (retrieved 2026-10-30)

Canonical URL: https://4ort.xyz/entity/cln3 · Last refreshed: October 30, 2026

Edit History

Rolling log of changes to this entity's Wikidata record. Values shown reflect the current state of each edited property — follow the history link to see the precise diff for any edit.

23w ago · Mathieu Kappler · 2026-05-20 view diff on Wikidata ↗

Hgnc gene symbol → CLN3

Genetic association → neuronal ceroid lipofuscinosis 3

Refseq rna id → NM_001286110, NM_000086, NM_001042432 +3

Microsoft academic id (discontinued) → 2779831896

+ 23 other properties edited (see Wikidata diff for full list)

"/* wbeditentity-update-languages-short:0||gsw */ QuickStatements 3.0 [[:toollabs:qs-dev/batch/32527|batch #32527]]: human gene name and description in Alemannic"

Live feed via Wikidata EventStreams. New edits appear within minutes of being made on Wikidata.