Automated assembly of molecular mechanisms at scale from text mining and curated databases

Summary

Automated assembly of molecular mechanisms at scale from text mining and curated databases is a preprint^[1].

Key Facts

• Automated assembly of molecular mechanisms at scale from text mining and curated databases authored John Bachman^[2].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases authored Benjamin M Gyori^[3].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases authored Peter K. Sorger^[4].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's instance of is recorded as preprint^[5].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's DOI is recorded as 10.1101/2022.08.30.505688^[6].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's publication date is recorded as +2022-08-31T00:00:00Z^[7].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's main subject is recorded as Integrated Network and Dynamical Reasoning Assembler^[8].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's main subject is recorded as data integration^[9].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's main subject is recorded as text mining^[10].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's published in is recorded as bioRxiv^[11].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's title is recorded as Automated assembly of molecular mechanisms at scale from text mining and curated databases^[12].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as Adeft: Acromine-based Disambiguation of Entities from Text with applications to the biomedical literature^[13].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms^[14].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as The BioPAX community standard for pathway data sharing^[15].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as ChEBI in 2016: Improved services and an expanding collection of metabolites^[16].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as shinyDepMap, a tool to identify targetable cancer genes and their functional connections from Cancer Dependency Map data^[17].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as Integration of Structured Biological Data Sources using Biological Expression Language^[18].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as RLIMS-P 2.0: A Generalizable Rule-Based Information Extraction System for Literature Mining of Protein Phosphorylation Information^[19].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models^[20].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as Large-scale event extraction from literature with multi-level gene normalization^[21].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as Pirh2, an Ubiquitin E3 Ligase, Inhibits p73 Transcriptional Activity by Promoting Its Ubiquitination^[22].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as 1,500 scientists lift the lid on reproducibility^[23].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as MitoCarta3.0: an updated mitochondrial proteome now with sub-organelle localization and pathway annotations^[24].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as ErbB2-dependent chemotaxis requires microtubule capture and stabilization coordinated by distinct signaling pathways^[25].
• Automated assembly of molecular mechanisms at scale from text mining and curated databases's cites work is recorded as Human skin neural crest progenitor cells are susceptible to BRAF(V600E)-induced transformation^[26].

Body

Designation and Status

Automated assembly of molecular mechanisms at scale from text mining and curated databases's instance of is recorded as preprint^[5].